2008 Publications

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Sands LP, Xu H, Weiner M, Rosenmann M, Craig BA, Thomas J. 2008. Comparison of Resource Utilization for Medicaid Dementia Patients using Nursing Homes versus Home and Community Based Waivers for Long-term Care, Medical Care, 46(4), 449-453.
Troped PJ, Oliveira MS, Matthews CE, Cromley EK, Melly SJ, and Craig BA. 2008. Prediction of activity mode with global positioning system and accelerometer data, Medicine and Science in Sports and Exercise, 40(5), 972-978.
Williamson, TE, Craig, BA, Kondrashkina, E, Bailey-Kellogg, C, and Friedman, AM. 2008. Analysis of self-associating proteins by singular value decomposition of solution scattering data, Biophysical Journal, 94(12) 4906-4923.
Sink K, Thomas J, Xu H, Craig B, Kritchevsky, Sands LP. 2008. Dual Use of Bladder Anticholinergics and Cholinesterase Inhibitors: Long-term Functional and Cognitive Outcomes, Journal of the American Geriatrics Society, 56, 847-853.
Teegarden, D, White, K, Lyle, RM, Zemel, MB, Van Loan, M, Matkovic, V, Craig, BA and Schoeller, D. 2008. Calcium and dairy product modulation of lipid utilization and energy expenditure, Obesity, 16(7), 1566-1572.
Schinckel, A.P., Einstein, M.E., Foster, K., and Craig, B.A. 2007. Evaluation of the impact of errors in the measurement of backfat depth on the prediction of fat-free lean percentage, The Professional Animal Scientist, 85(8) 2031-2042.
Cuendet M, Oteham CP, Maiti A, Craig BA, Cushman M, Moon RC, and Pezzuto JM. 2008. Zapotin Prevents Mouse Skin Tumorigenesis During the Stages of Initiation and Promotion, Anticancer Research, 28, 3705-3709.
J. Ghosh, M. Bogdan and M. Zak-Szatskowa, 2008. Selecting Explanatory Variables with the modified version of Bayesian Information criterion, Quality and Reliability Engineering, International Wiley Publisher.
J. Ghosh, R.D. Martin, 2008/2009.Stichastic Approximation and Newton's Estimate of a Mixing Distribution, Statistical Science.
J. Ghosh, S. Tokdar and R. G. Martin, 2008/2009.Consistency of a Recursive Estimate of Mixing Distributions, Anals of Statistics.
J. Ghosh, R.G. Martin. 2008/2009. On Two Fast Algorithms for Estimating the Mixing Distribution in Mixture Models, Proc of Frontiers in Applied n Computational Mathematics at New Jersey Inst of Technology.
J. Ghosh, M. Bogdan, and T. Samanta. 2008. Applied Statistics and the Indianess of Indian Data, Sankhy Ser. B, Vol. 70, pp 1 -17.
Atkinson SA, McCabe GP, Weaver CM, Abrams SA, and Oâ€™Brien KO. 2008. Are current calcium recommendations for adolescents higher than needed to achieve optimal peak bone mass? The controversy. Journal of Nutrition 138: 1182-1186.
Hill KM, Braun M, Kern M, Martin BM, Navalta JW, Sedlock DA, McCabe L, McCabe G.P, Peacock M, and Weaver CM. 2008. Predictors of calcium retention in boys. Journal of Clinical Endocrinology & Metabolism 93(12): 4743-4748.
Weaver CM, McCabe LD, McCabe GP, Braun M, Martin BM, DiMeglio LA, and Peacock M. 2008. Vitamin D status and calcium metabolism in adolescent black and white girls on a range of controlled calcium intakes. Journal of Clinical Endocrinology & Metabolism 93(10):3907-3914.
Eicher-Miller H, Mason A, Abbott AR, McCabe GP, and Boushey CJ. 2008. The effect of food stamp nutrition education on the food insecurity of low-income women participants. to appear in Journal of Nutrition Education and Behavior.
Campbell, WW, Johnson CA, McCabe GP, and Carnell NS. 2008. Dietary protein requirements of younger and older adults. American Journal of Clinical Nutrition 88:1322-1329.
Hill, KM, Braun, M, Kern, M, Martin, BR, Navalta, JW, Sedlock, DA, McCabe, L, McCabe GP, Peacock, M, and Weaver, CM. 2008. Predictors of calcium retention in adolescent boys. Journal of Clinical Endocrinology & Metabolism 93(12):4743-4748.
Badylak SF, Valentin JE, Ravindra A, McCabe G, and Stewart-Akers AM. 2008. Macrophage phenotype as a determinant of biologic scaffold remodeling. Tissue Engineering: Part A 14(11): 1835-1842.
M.-Y. Brusniak, B. Bodenmiller, D. Campbell, K. Cooke, J. Eddes, S. Letarte, L. N. Mueller, V. Sharma, O. Vitek, R. Aebersold, J. D. Watts. 2008. Corra: A LC-MS framework and computational tools for discovery and targeted mass spectrometry-based proteomics. BMC Bioinformatics, 9, p.542.
3. S. Letarte, M.-Y. Brusniak, D. Campbell, J. Eddes, C. J. Kemp, H. Lau, L. Mueller, A. Schmidt, P. Shannon, K. S. Kelly-Spratt, O. Vitek, H. Zhang, R. Aebersold and J. D. Watts. 2008. Differential Plasma Glycoproteome of p19ARF Skin Cancer Mouse Model Using the Corra Label-Free LC-MS Proteomics Platform", Proteomics: Clinical Applications, 4, p.105-116.
4. I. R. Baxter, O. Vitek, B. Lahner, B. Muthukumar, M. Borghi, J. Morrissey, M. L. Guerinot, D. E. Salt. 2008. The leaf ionome as a multivariable system to detect a plant's physiological status, Proceedings of the National Academy of Sciences, 105, p.12081-12086.
Lingmin Zeng, Jing Wu, and Jun Xie. 2008. Statistical methods in integrative analysis for gene regulatory modules. Statistical Applications in Genetics and Molecular Biology, Vol. 7(1), Article 28.
Hong-Mei Li, Lijie Sun, Omprakash Mittapalli, William M. Muir, Jun Xie, Jing Wu, Brandi Schemerhorn, Weilin Sun, Larry Murdock, and Barry R. Pittendrigh. 2008. Transcriptional Signatures in Response to Wheat Germ Agglutinin and Starvation in Drosophila melanogaster Larval Midgut, Insect Molecular Biology, doi:10.1111/j.1365-2583.2008.00844.x.
Hong-Mei Li, Grzegorz Buczkowski, Omprakash Mittapalli, Jun Xie, Jing Wu, Rick Westerman, Brandy Schemerhorn, Larry L. Murdock, and Barry R. Pittendrigh. 2008. Transcriptomic profiles of Drosophila melanogaster third instar larval midgut and responses to oxidative stress, Insect Molecular Biology, Vol. 17(4), 325-339.
N.-H. Chan, L. Peng and D. Zhang. 2008. Empirical likelihood based confidence intervals for conditional variance in heteroscedastic regression models. Econometric Theory. To appear.
M. Zhang, D. Zhang and M. T., Wells. 2008. Variable selection with large p small n regression models: mapping QTL with epistasis. Submitted to BMC Bioinformatics, in Revision.
T.R. Mhyre, R. Loy, P.N. Tariot, L.A. Profenno, K.A. Maguire-Zeiss, D. Zhang, P.D. Coleman and H.J. Federoff . 2008. Proteomic analysis of peripheral leukocytes in Alzheimer's disease patients treated with divalproex sodium. Neurobiology of Aging, 29: 1631-1643.
H.-T. Leung, L. An_, J. Tseng-Crank, E. Kim, E.L. Harness, Y. Zhou, J. Kitamoto, G. Li, R.W. Doerge, and W.L. Pak. 2008. Phototransduction in Drosophila: Use of microarrays in cloning genes identified by chemically induced mutations causing ERG defects. In S.J. Fliesler and O.G. Kisselev (eds.), Signal Transduction in the Retina, Taylor and Francis/CRC Press, pp195-217.
M. Tanurdzic, M. Vaughn, H. Jiang_, L. Lee, E. Thompson, R.W. Doerge, and R.A. Martienssen. 2008. Epigenomic consequences of immortalized plant cell suspension culture. Public Library of Science Biology (PLoS Biology). 6(12):2880-2895.
S.-Y. Yoo and R.W. Doerge. Integrating Epigenomics Results. 2008. Epigenomics. A. Ferguson-Smith et al. (eds) Springer-Verlag. 37-52.
R.W. Doerge. 2008. Statistical Advances in Functional Genomics. R. Varshney and R. Tuberosa (eds.), Genomic Assisted Crop Improvement: Vol. 1: Genomics Approaches and Platforms, 315-332. Springer-Verlag.
K. Spach, L. An, M. Blake, E. Blankenhorn, J. Bunn, R. Doerge, B. McElvany, R. Noubade, K. Tung, and C. Teuscher. 2008. Age, season and stress influence EAE sexual dimorphism in SJL/J mice. Journal of Neuroimmunology. 203(2):212-212.
P. Jones, T. Archer, S. Baylin, et al. 2008. Moving AHEAD with an international human epigenome project . Nature. 454(7205):711-715.
L. An_ and R.W. Doerge. 2008. Dynamic clustering of cell-cycle gene expression data. The Proceedings of the Kansas State University Conference on Applied Statistics in Agriculture. Manhattan, KS. pp18-36.
S.-Y. Yoo_ and R.W. Doerge. 2008. A two-stage approach for estimating the effect of DNA methylation on differential expression using tiling array technology. 2008. The Proceedings of the Kansas State University Conference on Applied Statistics in Agriculture. Manhattan, KS. pp124-137.