BQuant is developed and tested in R 2.11.1. It depends on the following libraries, available on the R website: , These packages must be installed prior to the loading of BQuant.
The beta version of the R package BQuant can be downloaded here: BQuant_1.0.zip. Then it can be installed in R through the drop down menu "Packages" -> "Install package(s) from local .zip files...". The reference manual is available here: BQuant_1.0_Manual.pdf with a demo example given. The source code is available here: BQuant_1.0_Source.zip.